Publications

Transgenerational epigenetic effect of kings’ aging on offspring’s caste fate mediated by sperm DNA methylation in termites

Published in Proceedings of the National Academy of Sciences, 2025

Recommended citation: Takata, M.^*, Takahashi, M.^*, Ishibashi, T., Tasaki, E., Rueppell, O., Vargo, L. E., Matsuura, K.^† (2025) "Transgenerational epigenetic effect of kings’ aging on offspring’s caste fate mediated by sperm DNA methylation in termites" Proceedings of the National Academy of Sciences, 122 (24) e2509506122 https://doi.org/10.1073/pnas.2509506122

Optical microscopic imaging, manipulation, and analysis methods for morphogenesis research

Published in Microscopy, 2024

Recommended citation: Katoh, A. T.^*†, Fukai, T. Y.^*†, Ishibashi, T.^*†. (2024) "Optical microscopic imaging, manipulation, and analysis methods for morphogenesis research" Microscopy, 73 (3): 226-242. https://doi.org/10.1093/jmicro/dfad059

Antiviral effects of micafungin against pteropine orthoreovirus, an emerging zoonotic virus carried by bats

Published in Virus Research, 2024

Recommended citation: Hondo, E.^*†, Katta, T.^*, Sato, A., Kadofusa, N., Ishibashi, T., Shimoda, H., Katoh, H., Iida, A. (2024) "Antiviral effects of micafungin against pteropine orthoreovirus, an emerging zoonotic virus carried by bats" Virus Research, 339:199248. http://dx.doi.org/10.1016/j.virusres.2023.199248

Epithelial cell chirality emerges through the dynamic concentric pattern of actomyosin

Published in bioRχiv, 2023

Recommended citation: Yamamoto, T.^*, Ishibashi, T.^*, Kiyosue-Mimori, Y., Hiver, S., Tokushige, N., Tarama, M., Takeichi, M., Shibata, T.^† (2023) "Epithelial cell chirality emerges through the dynamic concentric pattern of actomyosin" bioRχiv. https://doi.org/10.1101/2023.08.16.553476

Plastic brain structure changes associated with the division of labor and aging in termites

Published in Development, Growth & Differentiation, 2023

Recommended citation: Ishibashi, T.^*, Waliullah, A.S.M.^*, Aramaki, S., Kamiya, M., Kahyo, T., Nakamura, K., Tasaki, E., Takata, M., Setou, M., Matsuura, K.^† (2023) "Plastic brain structure changes associated with the division of labor and aging in termites" Development, Growth & Differentiation. https://doi.org/10.1111/dgd.12873

The Drosophila AWP1 ortholog Doctor No regulates JAK/STAT signaling for left-right asymmetry in the gut by promoting receptor endocytosis

Published in Development, 2023

Recommended citation: Lai, YT., Sasamura, T., Kuroda, J., Maeda, R., Nakamura, M., Hatori, R., Ishibashi, T., Taniguchi, K., Ooike, M., Taguchi, T., Nakazawa, N., Hozumi, S., Okumura, T., Aigaki, T., Inaki, M.^†, Matsuno, K.^† (2023) "The Drosophila AWP1 ortholog Doctor No regulates JAK/STAT signaling for left-right asymmetry in the gut by promoting receptor endocytosis" Development. https://doi.org/10.1242/dev.201224

extra macrochaetae, encoding Drosophila Id, controls apical cell shape in the hindgut epithelium

Published in microPublication Biology, 2022

Recommended citation: Ishibashi, T., Matusno, K.^† (2022) microPublication Biology https://doi.org/10.17912/micropub.biology.000526

Statistical validation verifies that enantiomorphic states of cell chirality are determinant dictating the left- or right-handed direction of the hindgut rotation in Drosophila

Published in Symmetry, 2020

Recommended citation: Ishibashi, T., Inaki, M., Matusno, K.^† (2020) Symmetry, 12(12):1991. https://doi.org/10.3390/sym12121991

A non-invasive method for sexing first and second instar larvae of termites using external morphology

Published in Insectes Sociaux, 2020

Recommended citation: Takata, M.^†, Inagaki, T, Ishibashi, T., Tasaki, E, Matsuura, K. (2020) Insectes Sociaux, 67:487–493. http://link.springer.com/article/10.1007/s00040-020-00785-2

E and Id transcription factors regulate cell chirality to induce left-right asymmetric morphogenesis of gut in Drosophila

Published in Annual Report of Research Center for Structural Thermodynamics, 2020

Recommended citation: Ishibashi, T., Matsuno, K.^† (2020) Annual Report of Research Center for Structural Thermodynamics, 40:82-83. http://www.chem.sci.osaka-u.ac.jp/lab/micro/report/rctes/2019/index.html.en

ATeam technology for detecting early signs of viral cytopathic effect

Published in Journal of Veterinary Medical Science, 2020

Recommended citation: Doysabas, KCC., Oba, M., Ishibashi, T., Shibata, H., Takemae, H, Shimoda, H., Mizutani, T., Iida, A., Hondo, E.^† (2020) Journal of Veterinary Medical Science, 82(3):387-393. https://doi.org/10.1292/jvms.20-0021

Cells with Broken Left–Right Symmetry: Roles of Intrinsic Cell Chirality in Left–Right Asymmetric Epithelial Morphogenesis

Published in Symmetry, 2019

Recommended citation: Utsunomiya, S., Sakamura, S., Sasamura, T., Ishibashi, T., Maeda, C., Inaki, M.^†, Matsuno, K.^† (2019) Symmetry, 11:4. https://www.mdpi.com/2073-8994/11/4/505

E and ID proteins regulate cell chirality and left–right asymmetric development in Drosophila

Published in Genes to Cells, 2019

Recommended citation: Ishibashi, T., Hatori, R., Maeda, R., Nakamura, M., Taguchi, T., Matsuyama, Y., Matusno, K.^† (2019) Genes to Cells, 24:3. https://onlinelibrary.wiley.com/doi/full/10.1111/gtc.12669

Chiral cell sliding drives left-right asymmetric organ twisting

Published in eLife, 2018

Recommended citation: Inaki, M., Hatori, R., Nakazawa, N., Okumura, T., Ishibashi, T., Kikuta, J., Ishii, M., Matsuno, K.^†, Honda, H.^† (2018) eLife 7:e32506. https://elifesciences.org/articles/32506

A gain-of-function screen to identify genes that reduce lifespan in the adult of Drosophila melanogaster

Published in BMC Genetics, 2014

Recommended citation: Nakayama, M., Ishibashi, T., Ishikawa, HO., Sato, H., Usui, T., Okuda, T., Yashiro, H., Ishikawa, H., Taikou, Y., Minami, A., Kato, K., Taki, M., Aigaki, T., Gunji, W., Ohtsu, M., Murakami, Y., Tanuma, S., Tsuboi, A., Adachi, M., Kuroda, J., Sasamura, T., Yamakawa, T., Matsuno, K.^† (2014) BMC Genetics. https://bmcgenet.biomedcentral.com/articles/10.1186/1471-2156-15-46

Tomoki Ishibashi, Ph.D.

Publications